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Sleeping Beauties of Coronavirus Research.
Fazeli-Varzaneh M, Ghorbi A, Ausloos M, Sallinger E, Vahdati S. Fazeli-Varzaneh M, et al. IEEE Access. 2021 Jan 19;9:21192-21205. doi: 10.1109/ACCESS.2021.3052918. eCollection 2021. IEEE Access. 2021. PMID: 34786306 Free PMC article.
Mitigating Bias in Radiology Machine Learning: 3. Performance Metrics.
Faghani S, Khosravi B, Zhang K, Moassefi M, Jagtap JM, Nugen F, Vahdati S, Kuanar SP, Rassoulinejad-Mousavi SM, Singh Y, Vera Garcia DV, Rouzrokh P, Erickson BJ. Faghani S, et al. Radiol Artif Intell. 2022 Aug 24;4(5):e220061. doi: 10.1148/ryai.220061. eCollection 2022 Sep. Radiol Artif Intell. 2022. PMID: 36204539 Free PMC article.
Mitigating Bias in Radiology Machine Learning: 2. Model Development.
Zhang K, Khosravi B, Vahdati S, Faghani S, Nugen F, Rassoulinejad-Mousavi SM, Moassefi M, Jagtap JMM, Singh Y, Rouzrokh P, Erickson BJ. Zhang K, et al. Radiol Artif Intell. 2022 Aug 24;4(5):e220010. doi: 10.1148/ryai.220010. eCollection 2022 Sep. Radiol Artif Intell. 2022. PMID: 36204532 Free PMC article.
Halogenation-Guided Chemical Screening Provides Insight into Tjipanazole Biosynthesis by the Cyanobacterium Fischerella ambigua.
Chilczuk T, Schäberle TF, Vahdati S, Mettal U, El Omari M, Enke H, Wiese M, König GM, Niedermeyer THJ. Chilczuk T, et al. Chembiochem. 2020 Aug 3;21(15):2170-2177. doi: 10.1002/cbic.202000025. Epub 2020 Apr 16. Chembiochem. 2020. PMID: 32182403 Free PMC article.
Chemistry-guided screening with a software tool dedicated to identifying halogenated compounds in HPLC-MS data indicated the presence of several uncharacterised HNPs in an extract of the cyanobacterium Fischerella ambigua (Nag.) Gomont 108b. Three new natural products, tjipanazol …
Chemistry-guided screening with a software tool dedicated to identifying halogenated compounds in HPLC-MS data indicated the presence of sev …
Combining independent de novo assemblies to optimize leaf transcriptome of Persian walnut.
Sadat-Hosseini M, Bakhtiarizadeh MR, Boroomand N, Tohidfar M, Vahdati K. Sadat-Hosseini M, et al. PLoS One. 2020 Apr 28;15(4):e0232005. doi: 10.1371/journal.pone.0232005. eCollection 2020. PLoS One. 2020. PMID: 32343733 Free PMC article.
Fifteen different transcriptome assemblies were constructed from five different well-known assemblers used in scientific literature with different k-mer lengths (Bridger, BinPacker, SOAPdenovo-Trans, Trinity and SPAdes) as well as two merging approaches (EvidentialGene and …
Fifteen different transcriptome assemblies were constructed from five different well-known assemblers used in scientific literature with dif …
Predictive modeling of Persian walnut (Juglans regia L.) in vitro proliferation media using machine learning approaches: a comparative study of ANN, KNN and GEP models.
Sadat-Hosseini M, Arab MM, Soltani M, Eftekhari M, Soleimani A, Vahdati K. Sadat-Hosseini M, et al. Plant Methods. 2022 Apr 11;18(1):48. doi: 10.1186/s13007-022-00871-5. Plant Methods. 2022. PMID: 35410228 Free PMC article.
In the present study, three machine learning (ML) approaches including multi-layer perceptron neural network (MLPNN), k-nearest neighbors (KNN) and gene expression programming (GEP) were implemented and compared to multiple linear regression (MLR) to develop models for pre …
In the present study, three machine learning (ML) approaches including multi-layer perceptron neural network (MLPNN), k-nearest neigh …
Genome-wide association analysis and pathway enrichment provide insights into the genetic basis of photosynthetic responses to drought stress in Persian walnut.
Arab MM, Brown PJ, Abdollahi-Arpanahi R, Sohrabi SS, Askari H, Aliniaeifard S, Mokhtassi-Bidgoli A, Mesgaran MB, Leslie CA, Marrano A, Neale DB, Vahdati K. Arab MM, et al. Hortic Res. 2022 Aug 1;9:uhac124. doi: 10.1093/hr/uhac124. eCollection 2022. Hortic Res. 2022. PMID: 35928405 Free PMC article.
We performed genome-wide association studies (GWAS) using three genomic datasets: genotyping by sequencing data (43 K SNPs) on both mother trees (MGBS) and progeny (PGBS) and the Axiom Juglans regia 700 K SNP array data (295 K SNPs) on mother trees (MArray). …
We performed genome-wide association studies (GWAS) using three genomic datasets: genotyping by sequencing data (43 K SNPs) on both m …
Antioxidant and Anticancer Activities of Walnut (Juglans regia L.) Protein Hydrolysates Using Different Proteases.
Jahanbani R, Ghaffari SM, Salami M, Vahdati K, Sepehri H, Sarvestani NN, Sheibani N, Moosavi-Movahedi AA. Jahanbani R, et al. Plant Foods Hum Nutr. 2016 Dec;71(4):402-409. doi: 10.1007/s11130-016-0576-z. Plant Foods Hum Nutr. 2016. PMID: 27679440 Free PMC article.
The enzymatic hydrolysate of Persian walnut (Chandler) seed proteins was prepared by incubation with three different proteases, including pancreatic chymotrypsin and trypsin, and a microbial enzyme proteinase K. The hydrolysates were found to possess excellent antioxidant …
The enzymatic hydrolysate of Persian walnut (Chandler) seed proteins was prepared by incubation with three different proteases, including pa …
The antimicrobial effect of lactobacillus casei culture supernatant against multiple drug resistant clinical isolates of Shigella sonnei and Shigella flexneri in vitro.
Mirnejad R, Vahdati AR, Rashidiani J, Erfani M, Piranfar V. Mirnejad R, et al. Iran Red Crescent Med J. 2013 Feb;15(2):122-6. doi: 10.5812/ircmj.7454. Epub 2013 Feb 5. Iran Red Crescent Med J. 2013. PMID: 23682323 Free PMC article.
In addition, the antimicrobial activity remained active treatment after adjust pH 7, adding Proteinase K and heating for L. casei. RESULTS: The results implicate that L. casei strongly inhibits the development of pathogen samples. ...L. casei highly resistant against to an …
In addition, the antimicrobial activity remained active treatment after adjust pH 7, adding Proteinase K and heating for L. casei. RE …